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Psed_1850 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1850" - Oxidoreductase domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1850Oxidoreductase domain-containing protein (735 aa)    
Predicted Functional Partners:
Psed_1851
Heparinase II/III family protein (662 aa)
 
          0.985
Psed_1852
Lipoprotein (518 aa)
 
          0.969
Psed_1854
Group 1 glycosyl transferase (412 aa)
 
          0.965
Psed_1849
Asparagine synthase (1049 aa)
 
          0.963
Psed_1848
Nucleotide sugar dehydrogenase (441 aa)
 
   
  0.943
Psed_1857
Family 2 glycosyl transferase (318 aa)
 
   
  0.882
Psed_1894
NAD-dependent epimerase/dehydratase (341 aa)
 
   
  0.881
Psed_1853
Hypothetical protein (420 aa)
              0.866
Psed_5999
Short-chain dehydrogenase/reductase SDR (321 aa)
 
 
  0.854
Psed_1844
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (505 aa)
 
          0.848
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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