STRINGSTRING
Psed_1869 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1869" - Polysaccharide biosynthesis protein CelD in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1869Polysaccharide biosynthesis protein CelD (353 aa)    
Predicted Functional Partners:
Psed_0711
Hypothetical protein (197 aa)
   
          0.696
Psed_5615
RDD domain-containing protein (273 aa)
   
          0.670
Psed_5394
Hypothetical protein (138 aa)
   
          0.639
Psed_1868
Histidine kinase (451 aa)
              0.627
Psed_0656
Hypothetical protein (230 aa)
   
          0.553
Psed_5222
Creatininase (235 aa)
   
          0.506
Psed_3154
SARP family transcriptional regulator (285 aa)
   
          0.501
Psed_1035
Hypothetical protein (186 aa)
   
          0.476
Psed_4009
UspA domain-containing protein (175 aa)
   
          0.464
Psed_1956
FhuF/siderophore biosynthesis protein (289 aa)
   
          0.452
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]