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Psed_1879 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1879" - Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1879Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (509 aa)    
Predicted Functional Partners:
Psed_1878
Group 1 glycosyl transferase (403 aa)
 
   
  0.962
Psed_1877
Lipopolysaccharide biosynthesis protein (318 aa)
              0.845
Psed_1875
dTDP-glucose 4,6-dehydratase (335 aa)
 
   
  0.830
Psed_1881
Group 1 glycosyl transferase (379 aa)
 
   
  0.803
Psed_5214
Family 2 glycosyl transferase (301 aa)
   
  0.774
Psed_3984
UDP-glucose 4-epimerase (319 aa)
 
     
  0.745
Psed_0574
Polysaccharide deacetylase (735 aa)
         
  0.711
Psed_0571
Polysaccharide deacetylase (899 aa)
         
  0.711
Psed_1886
DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)
 
     
  0.708
Psed_3663
Group 1 glycosyl transferase (373 aa)
 
   
  0.699
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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