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Psed_1886 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1886" - DegT/DnrJ/EryC1/StrS aminotransferase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1886DegT/DnrJ/EryC1/StrS aminotransferase (369 aa)    
Predicted Functional Partners:
Psed_1888
Oxidoreductase domain-containing protein (372 aa)
 
   
  0.984
Psed_1885
N-acetylglucosamine-1-phosphate uridyltransferase (189 aa)
 
 
  0.949
Psed_1887
DegT/DnrJ/EryC1/StrS aminotransferase (386 aa)
 
       
0.886
Psed_1884
Family 2 glycosyl transferase (366 aa)
 
   
  0.800
Psed_1889
UDP-glucose 4-epimerase (319 aa)
   
   
  0.774
Psed_1476
Oxidoreductase domain-containing protein (352 aa)
 
   
  0.709
Psed_1879
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (509 aa)
 
     
  0.708
Psed_1850
Oxidoreductase domain-containing protein (735 aa)
   
   
  0.676
Psed_1844
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase (505 aa)
 
     
  0.673
Psed_1883
Polysaccharide deacetylase (270 aa)
   
   
  0.664
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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