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Psed_1894 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1894" - NAD-dependent epimerase/dehydratase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1894NAD-dependent epimerase/dehydratase (341 aa)    
Predicted Functional Partners:
Psed_1896
C-methyltransferase (431 aa)
     
  0.987
Psed_1895
LmbE family protein (221 aa)
 
          0.968
Psed_1860
Glucose-1-phosphate cytidylyltransferase (275 aa)
 
   
  0.894
Psed_1857
Family 2 glycosyl transferase (318 aa)
 
   
  0.887
Psed_1850
Oxidoreductase domain-containing protein (735 aa)
 
   
  0.881
Psed_0176
Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis (303 aa)
       
  0.858
Psed_0880
LmbE family protein (224 aa)
 
          0.858
Psed_1893
dTDP-4-dehydrorhamnose 3,5-epimerase (180 aa)
 
 
  0.829
Psed_1848
Nucleotide sugar dehydrogenase (441 aa)
 
   
  0.796
Psed_1892
C-methyltransferase (365 aa)
 
          0.781
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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