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Psed_1904 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1904" - Haloacid dehalogenase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1904Haloacid dehalogenase (196 aa)    
Predicted Functional Partners:
Psed_3425
Haloacid dehalogenase (240 aa)
   
   
    0.953
Psed_2664
Haloacid dehalogenase (229 aa)
   
   
    0.951
Psed_2977
Betaine-aldehyde dehydrogenase (491 aa)
   
 
    0.903
proB
Glutamate 5-kinase; Catalyzes the transfer of a phosphate group to glutamate to form L-glutamate 5-phosphate (382 aa)
   
 
    0.902
Psed_0128
Haloacid dehalogenase (227 aa)
   
   
 
0.850
Psed_1297
Haloacid dehalogenase (225 aa)
   
   
 
0.846
Psed_1903
Carboxylate-amine ligase ybdK (853 aa)
              0.545
hisH
Imidazole glycerol phosphate synthase subunit HisH; IGPS catalyzes the conversion of PRFAR and glutamine to IGP, AICAR and glutamate. The HisH subunit provides the glutamine amidotransferase activity that produces the ammonia necessary to HisF for the synthesis of IGP and AICAR (252 aa)
     
      0.540
secY
Preprotein translocase subunit SecY; The central subunit of the protein translocation channel SecYEG. Consists of two halves formed by TMs 1-5 and 6-10. These two domains form a lateral gate at the front which open onto the bilayer between TMs 2 and 7, and are clamped together by SecE at the back. The channel is closed by both a pore ring composed of hydrophobic SecY resides and a short helix (helix 2A) on the extracellular side of the membrane which forms a plug. The plug probably moves laterally to allow the channel to open. The ring and the pore may move independently (438 aa)
     
      0.537
Psed_1902
Asparagine synthase (593 aa)
   
        0.488
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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