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Psed_1923 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1923" - tryptophanyl-tRNA synthetase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1923tryptophanyl-tRNA synthetase (346 aa)    
Predicted Functional Partners:
pheT
Phenylalanyl-tRNA synthetase subunit beta (846 aa)
 
   
  0.893
trpS
tryptophanyl-tRNA synthetase (341 aa)
         
 
0.800
leuS
leucyl-tRNA synthetase (956 aa)
 
   
  0.783
Psed_5653
seryl-tRNA synthetase (420 aa)
   
 
  0.772
argS
arginyl-tRNA synthetase (547 aa)
   
   
  0.768
gltX
glutamyl-tRNA synthetase; Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction- glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) (497 aa)
 
   
  0.766
thrS
threonyl-tRNA synthetase (682 aa)
   
   
  0.762
Psed_3872
RNA binding S1 domain-containing protein (487 aa)
 
   
  0.760
Psed_2107
Methionine synthase (603 aa)
   
   
  0.733
ileS
isoleucyl-tRNA synthetase; Catalyzes the attachment of isoleucine to tRNA(Ile). As IleRS can inadvertently accommodate and process structurally similar amino acids such as valine, to avoid such errors it has two additional distinct tRNA(Ile)-dependent editing activities. One activity is designated as ’pretransfer’ editing and involves the hydrolysis of activated Val-AMP. The other activity is designated ’posttransfer’ editing and involves deacylation of mischarged Val-tRNA(Ile) (1096 aa)
   
   
  0.715
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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