STRINGSTRING
Psed_1935 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1935" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1935Hypothetical protein (118 aa)    
Predicted Functional Partners:
Psed_1516
Integral membrane protein (119 aa)
   
          0.704
Psed_0445
Hypothetical protein (316 aa)
   
          0.605
Psed_4003
Hypothetical protein (151 aa)
   
          0.587
Psed_1932
TetR family transcriptional regulator (196 aa)
 
          0.572
Psed_3562
Peptidase S1 and S6 chymotrypsin/Hap (300 aa)
   
          0.552
Psed_2630
Xenobiotic-transporting ATPase (600 aa)
   
          0.547
Psed_1934
Hypothetical protein (375 aa)
              0.518
Psed_1933
Phosphonate-transporting ATPase (226 aa)
              0.518
Psed_5063
Hypothetical protein (233 aa)
   
          0.511
Psed_5822
G-D-S-L family lipolytic protein (266 aa)
   
          0.484
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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