STRINGSTRING
Psed_1943 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1943" - Sterol 3-beta-glucosyltransferase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1943Sterol 3-beta-glucosyltransferase (418 aa)    
Predicted Functional Partners:
lspA
Lipoprotein signal peptidase; This protein specifically catalyzes the removal of signal peptides from prolipoproteins (186 aa)
              0.856
Psed_1944
Hypothetical protein (131 aa)
              0.632
Psed_3036
Major facilitator superfamily protein (481 aa)
   
          0.515
Psed_3005
Hypothetical protein (872 aa)
   
 
    0.465
Psed_2783
Phytoene desaturase (532 aa)
   
   
  0.455
Psed_2424
FAD dependent oxidoreductase (532 aa)
   
   
  0.455
Psed_6182
Kynurenine--oxoglutarate transaminase (387 aa)
       
      0.430
Psed_6012
Aspartate transaminase (391 aa)
       
      0.430
Psed_5465
Aspartate transaminase (407 aa)
       
      0.430
Psed_3566
Aspartate transaminase (384 aa)
       
      0.430
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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