STRINGSTRING
Psed_1955 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1955" - Glutamate synthase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1955Glutamate synthase (1522 aa)    
Predicted Functional Partners:
Psed_1954
Glutamate synthase, NADH/NADPH small subunit (484 aa)
  0.999
Psed_2303
Glutamate dehydrogenase (445 aa)
   
  0.999
trpB
Tryptophan synthase subunit beta; The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine (432 aa)
     
 
  0.999
Psed_4917
Glutamine synthetase I (451 aa)
   
 
  0.999
Psed_4574
Glutamine synthetase (473 aa)
   
 
  0.999
Psed_3968
Glutamine synthetase (447 aa)
   
 
  0.999
Psed_2546
Glutamine synthetase catalytic subunit (477 aa)
   
 
  0.999
Psed_2751
ferredoxin-NADP reductase (456 aa)
   
 
  0.996
Psed_4914
Glutamine amidotransferase (226 aa)
   
 
  0.995
Psed_4915
Glutamate synthase subunit alpha domain-containing protein (234 aa)
   
 
  0.995
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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