STRINGSTRING
Psed_1956 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_1956" - FhuF/siderophore biosynthesis protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_1956FhuF/siderophore biosynthesis protein (289 aa)    
Predicted Functional Partners:
Psed_1925
LysR family transcriptional regulator (311 aa)
   
          0.668
Psed_3558
PucR family transcriptional regulator (375 aa)
   
          0.600
Psed_5581
Hypothetical protein (178 aa)
   
          0.599
Psed_4407
Hypothetical protein (261 aa)
   
          0.554
Psed_0657
Hypothetical protein (326 aa)
   
          0.479
Psed_4869
Peptidase M48 Ste24p (379 aa)
   
          0.471
Psed_6484
Hypothetical protein (374 aa)
   
          0.468
Psed_0711
Hypothetical protein (197 aa)
   
          0.466
Psed_0656
Hypothetical protein (230 aa)
   
          0.464
Psed_4071
Hypothetical protein (270 aa)
   
          0.457
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (15%) [HD]