STRINGSTRING
Psed_2051 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2051" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2051Major facilitator superfamily protein (469 aa)    
Predicted Functional Partners:
Psed_2411
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (453 aa)
 
          0.821
Psed_2052
Hydrolase CocE/NonD family protein (556 aa)
 
          0.619
Psed_3691
Major facilitator superfamily protein (452 aa)
   
          0.515
Psed_5578
LuxR family transcriptional regulator (932 aa)
   
          0.504
Psed_2610
FAD dependent oxidoreductase (465 aa)
   
          0.452
Psed_2050
Hypothetical protein (320 aa)
              0.435
Psed_2393
Gas vesicle protein GvpA (66 aa)
   
          0.430
Psed_5509
Bile acid-sodium symporter (338 aa)
              0.408
Psed_4344
Bile acid-sodium symporter (332 aa)
              0.408
Psed_4209
F420-dependent protein (143 aa)
   
          0.409
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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