STRINGSTRING
Psed_2053 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2053" - Dyp-type peroxidase protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2053Dyp-type peroxidase protein (338 aa)    
Predicted Functional Partners:
Psed_3110
Linocin_M18 bacteriocin protein (274 aa)
 
        0.848
Psed_2054
DNA repair protein; With LigD forms a non-homologous end joining (NHEJ) DNA repair enzyme, which repairs dsDNA breaks with reduced fidelity. Binds linear dsDNA with 5’- and 3’- overhangs but not closed circular dsDNA nor ssDNA. Recruits and stimulates the ligase activity of LigD (336 aa)
              0.533
Psed_4832
Peptidase M75, Imelysin (389 aa)
   
   
  0.529
Psed_0893
Peptidase M75, Imelysin (375 aa)
   
   
  0.529
Psed_0890
Peptidase M75, Imelysin (379 aa)
   
   
  0.529
tatC
Sec-independent protein translocase subunit TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides (326 aa)
         
  0.495
Psed_1278
Type 11 methyltransferase (353 aa)
   
          0.491
Psed_4833
Iron permease (286 aa)
         
  0.477
Psed_0892
Iron permease (277 aa)
         
  0.477
Psed_0891
Iron permease (273 aa)
         
  0.477
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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