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Psed_2057 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2057" - citryl-CoA lyase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2057citryl-CoA lyase (310 aa)    
Predicted Functional Partners:
Psed_2058
formyl-CoA transferase (402 aa)
   
   
  0.875
Psed_2056
Nitrilotriacetate monooxygenase FMN-dependent oxidoreductase (442 aa)
              0.863
Psed_2059
LacI family transcriptional regulator (358 aa)
              0.683
Psed_6531
formyl-CoA transferase (393 aa)
   
   
  0.628
Psed_6208
formyl-CoA transferase (406 aa)
   
   
  0.628
Psed_4968
formyl-CoA transferase (408 aa)
   
   
  0.628
Psed_4941
formyl-CoA transferase (407 aa)
   
   
  0.628
Psed_4214
formyl-CoA transferase (382 aa)
   
   
  0.628
Psed_4198
formyl-CoA transferase (422 aa)
   
   
  0.628
Psed_4174
formyl-CoA transferase (398 aa)
   
   
  0.628
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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