STRINGSTRING
Psed_2060 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2060" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2060TetR family transcriptional regulator (208 aa)    
Predicted Functional Partners:
Psed_1782
TetR family transcriptional regulator (198 aa)
   
          0.731
Psed_2059
LacI family transcriptional regulator (358 aa)
              0.607
Psed_2058
formyl-CoA transferase (402 aa)
              0.607
Psed_2057
citryl-CoA lyase (310 aa)
              0.490
Psed_2056
Nitrilotriacetate monooxygenase FMN-dependent oxidoreductase (442 aa)
              0.490
Psed_5026
TetR family transcriptional regulator (203 aa)
   
          0.476
Psed_2061
long-chain-fatty-acid--CoA ligase (528 aa)
              0.471
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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