STRINGSTRING
Psed_2073 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2073" - Acyl dehydratase MaoC in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2073Acyl dehydratase MaoC (149 aa)    
Predicted Functional Partners:
Psed_2071
MmgE/PrpD family protein (445 aa)
 
          0.888
Psed_2072
Hypothetical protein (168 aa)
              0.873
Psed_2074
Pyruvate dehydrogenase (321 aa)
              0.863
Psed_2075
Pyruvate dehydrogenase (328 aa)
              0.862
Psed_2076
Biotin/lipoyl attachment domain-containing protein (86 aa)
              0.859
Psed_2069
enoyl-CoA hydratase (271 aa)
              0.817
Psed_2070
NADPH-quinone reductase (350 aa)
              0.817
Psed_2068
ABC transporter permease (288 aa)
              0.810
Psed_2067
ABC transporter (235 aa)
              0.810
Psed_2066
Monosaccharide-transporting ATPase (256 aa)
              0.810
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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