STRINGSTRING
Psed_2171 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2171" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2171TetR family transcriptional regulator (195 aa)    
Predicted Functional Partners:
Psed_6181
Hypothetical protein (371 aa)
   
          0.520
Psed_3552
TetR family transcriptional regulator (206 aa)
 
        0.505
Psed_2170
Flavin reductase domain-containing FMN-binding protein (170 aa)
              0.487
tatB
Sec-independent protein translocase tatB-like protein; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin-arginine motif in their signal peptide across membranes. Together with TatC, TatB is part of a receptor directly interacting with Tat signal peptides. TatB may form an oligomeric binding site that transiently accommodates folded Tat precursor proteins before their translocation (143 aa)
   
          0.448
Psed_4456
Hypothetical protein (187 aa)
   
          0.442
Psed_6145
Transcriptional activator domain-containing protein (1022 aa)
   
          0.414
Psed_0878
Peroxiredoxin (145 aa)
 
          0.404
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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