STRINGSTRING
Psed_2237 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2237" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2237Hypothetical protein (333 aa)    
Predicted Functional Partners:
Psed_2234
Thiolase (380 aa)
 
          0.836
Psed_2236
CoA-binding domain-containing protein (704 aa)
              0.798
Psed_2235
Hypothetical protein (106 aa)
              0.796
Psed_2497
Cyclase (299 aa)
   
          0.778
Psed_2233
Cyclohexanone monooxygenase (547 aa)
 
          0.633
Psed_2344
Hemerythrin HHE cation binding domain-containing protein (192 aa)
   
          0.515
Psed_2232
3-oxoacyl-ACP reductase (282 aa)
              0.513
Psed_3512
Hypothetical protein (248 aa)
   
          0.507
Psed_0128
Haloacid dehalogenase (227 aa)
   
          0.490
Psed_2903
TAP domain-containing protein (539 aa)
 
          0.440
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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