STRINGSTRING
Psed_2279 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2279" - 4-hydroxyphenylacetate 3-hydroxylase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_22794-hydroxyphenylacetate 3-hydroxylase (553 aa)    
Predicted Functional Partners:
Psed_6066
4-hydroxyphenylacetate 3-hydroxylase (531 aa)
   
   
 
0.854
Psed_0216
4-hydroxyphenylacetate 3-monooxygenase oxygenase subunit (493 aa)
   
   
 
0.850
Psed_2280
Hydroxyquinol 1,2-dioxygenase (274 aa)
   
        0.670
Psed_4039
Cysteine synthase (373 aa)
 
     
  0.649
Psed_6067
Flavin reductase domain-containing FMN-binding protein (190 aa)
 
   
  0.594
Psed_2528
Catechol 2,3 dioxygenase (309 aa)
 
     
  0.586
Psed_3099
Cysteine synthase (463 aa)
         
  0.583
Psed_1511
Cysteine synthase (316 aa)
         
  0.583
Psed_6161
Siderophore-interacting protein (272 aa)
           
  0.583
Psed_4508
Sulfate adenylyltransferase small subunit (300 aa)
           
  0.583
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (9%) [HD]