STRINGSTRING
Psed_2280 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2280" - Hydroxyquinol 1,2-dioxygenase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2280Hydroxyquinol 1,2-dioxygenase (274 aa)    
Predicted Functional Partners:
Psed_2224
Maleylacetate reductase (360 aa)
   
  0.966
Psed_2272
Maleylacetate reductase (367 aa)
   
  0.965
Psed_3024
Maleylacetate reductase (352 aa)
   
  0.957
Psed_4439
Maleylacetate reductase (383 aa)
   
  0.953
Psed_0665
Maleylacetate reductase (380 aa)
   
  0.951
Psed_4440
Maleylacetate reductase (331 aa)
 
   
    0.946
Psed_6301
Dienelactone hydrolase (247 aa)
   
 
  0.907
Psed_6290
Dienelactone hydrolase (250 aa)
   
 
  0.907
Psed_6035
Dienelactone hydrolase (247 aa)
   
 
  0.907
Psed_0235
Dienelactone hydrolase (234 aa)
   
 
  0.907
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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