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Psed_2361 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2361" - NAD-dependent epimerase/dehydratase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2361NAD-dependent epimerase/dehydratase (355 aa)    
Predicted Functional Partners:
Psed_2362
S-(hydroxymethyl)glutathione dehydrogenase (399 aa)
              0.701
Psed_3932
Beta-lactamase (438 aa)
   
          0.526
Psed_3252
Monooxygenase FAD-binding protein (403 aa)
   
          0.466
Psed_3203
MerR family transcriptional regulator (297 aa)
   
          0.444
Psed_1852
Lipoprotein (518 aa)
   
          0.440
Psed_0573
Hydrolase transmembrane protein (333 aa)
   
          0.414
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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