STRINGSTRING
Psed_2365 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2365" - Catalase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2365Catalase (293 aa)    
Predicted Functional Partners:
Psed_5669
Manganese/iron superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems (207 aa)
         
  0.916
Psed_2510
Aldehyde dehydrogenase (508 aa)
       
  0.901
Psed_2161
Aldehyde dehydrogenase (495 aa)
       
  0.901
Psed_1899
Aldehyde dehydrogenase (474 aa)
       
  0.901
Psed_1709
Aldehyde dehydrogenase (490 aa)
       
  0.901
Psed_1385
Aldehyde dehydrogenase (486 aa)
       
  0.901
Psed_2697
Phenylacetic acid degradation protein paaN (685 aa)
       
    0.900
Psed_5144
Superoxide dismutase, Ni (137 aa)
         
    0.900
Psed_2362
S-(hydroxymethyl)glutathione dehydrogenase (399 aa)
 
        0.643
Psed_3269
Hypothetical protein (84 aa)
   
          0.533
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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