STRINGSTRING
Psed_2368 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2368" - Iron sulfur domain-containing protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2368Iron sulfur domain-containing protein (74 aa)    
Predicted Functional Partners:
Psed_2367
Hypothetical protein (339 aa)
 
          0.972
Psed_2369
Methylase (215 aa)
 
          0.965
Psed_2366
Hypothetical protein (320 aa)
              0.866
Psed_0164
Hypothetical protein (275 aa)
   
          0.589
Psed_5594
ANTAR domain-containing protein (221 aa)
   
          0.581
Psed_1035
Hypothetical protein (186 aa)
   
          0.572
Psed_1952
Hypothetical protein (146 aa)
   
          0.560
Psed_3442
Hypothetical protein (388 aa)
 
          0.555
Psed_3284
Hypothetical protein (683 aa)
   
          0.524
Psed_2365
Catalase (293 aa)
              0.520
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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