STRINGSTRING
Psed_2386 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2386" - Cyclase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2386Cyclase (432 aa)    
Predicted Functional Partners:
Psed_2387
Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure (145 aa)
 
          0.978
Psed_2388
Gas vesicle synthesis GvpLGvpF (243 aa)
 
          0.969
Psed_2389
Gas vesicle protein GvpG (76 aa)
 
          0.969
Psed_2390
Gas vesicle synthesis family protein (278 aa)
 
          0.944
Psed_2392
Gas vesicle synthesis GvpLGvpF (249 aa)
 
          0.941
Psed_2391
Gas vesicle protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth (128 aa)
 
          0.940
Psed_2394
Gas vesicle protein K (99 aa)
 
          0.939
Psed_2393
Gas vesicle protein GvpA (66 aa)
 
          0.936
Psed_2385
Hypothetical protein (276 aa)
              0.869
Psed_4241
Gas vesicle structural protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure (99 aa)
 
          0.848
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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