STRINGSTRING
Psed_2410 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2410" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2410Major facilitator superfamily protein (440 aa)    
Predicted Functional Partners:
Psed_2411
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (453 aa)
 
          0.956
Psed_2412
ArsR family transcriptional regulator (290 aa)
 
          0.715
Psed_2408
Arsenical-resistance protein (381 aa)
              0.703
Psed_2407
Protein tyrosine phosphatase (225 aa)
              0.562
Psed_2409
ArsR family transcriptional regulator (127 aa)
              0.553
Psed_3691
Major facilitator superfamily protein (452 aa)
   
          0.499
Psed_2393
Gas vesicle protein GvpA (66 aa)
   
          0.498
Psed_5578
LuxR family transcriptional regulator (932 aa)
   
          0.479
Psed_2389
Gas vesicle protein GvpG (76 aa)
   
          0.478
Psed_2610
FAD dependent oxidoreductase (465 aa)
   
          0.442
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]