STRINGSTRING
Psed_2415 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2415" - HAD-superfamily hydrolase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2415HAD-superfamily hydrolase (223 aa)    
Predicted Functional Partners:
Psed_2414
Hypothetical protein (78 aa)
              0.859
Psed_2413
Hypothetical protein (78 aa)
              0.606
Psed_2932
NGG1p interacting factor 3 protein, NIF3 (383 aa)
   
        0.578
Psed_3428
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (437 aa)
   
        0.550
Psed_1365
GTP cyclohydrolase-2; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate (425 aa)
   
        0.550
Psed_3431
Ribulose-phosphate 3-epimerase (223 aa)
   
   
  0.548
Psed_1246
Ribulose-phosphate 3-epimerase (240 aa)
   
   
  0.548
Psed_3588
DNA polymerase I (939 aa)
   
   
  0.483
Psed_5020
PHP domain-containing protein (340 aa)
 
          0.455
lgt
Prolipoprotein diacylglyceryl transferase; Transfers the N-acyl diglyceride group on what will become the N-terminal cysteine of membrane lipoproteins (352 aa)
   
   
  0.443
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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