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Psed_2417 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2417" - 4Fe-4S ferredoxin in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_24174Fe-4S ferredoxin (286 aa)    
Predicted Functional Partners:
Psed_2418
Formate dehydrogenase subunit alpha (1078 aa)
 
  0.999
Psed_3298
Nitrate reductase (643 aa)
   
  0.986
Psed_2416
Polysulfide reductase NrfD (331 aa)
 
          0.941
Psed_4229
Nitrate reductase (817 aa)
   
  0.937
Psed_1088
Nitrate reductase (686 aa)
   
  0.937
Psed_2196
trimethylamine-N-oxide reductase (cytochrome c) (752 aa)
   
  0.934
Psed_1658
trimethylamine-N-oxide reductase (cytochrome c) (722 aa)
 
  0.934
Psed_1374
Nitrate reductase (726 aa)
   
  0.933
Psed_6473
Carbon-monoxide dehydrogenase (806 aa)
       
  0.903
Psed_6218
Carbon-monoxide dehydrogenase (788 aa)
       
  0.903
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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