STRINGSTRING
Psed_2436 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2436" - Nitroreductase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2436Nitroreductase (324 aa)    
Predicted Functional Partners:
Psed_2437
CBS domain-containing protein (193 aa)
 
          0.593
Psed_5724
Histidine kinase (1778 aa)
   
          0.488
Psed_0484
Abortive infection protein (296 aa)
   
          0.486
Psed_0430
Hypothetical protein (247 aa)
   
          0.459
Psed_6549
Hypothetical protein (345 aa)
   
          0.450
Psed_2299
Hypothetical protein (133 aa)
   
          0.432
egtA
Glutamate/cysteine ligase protein; Catalyzes the synthesis of gamma-glutamylcysteine (gamma-GC). This compound is used as substrate for the biosynthesis of the low-molecular thiol compound ergothioneine (455 aa)
   
          0.425
Psed_1019
DivIVA domain-containing protein (312 aa)
   
          0.410
Psed_2718
Hypothetical protein (149 aa)
   
          0.403
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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