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Psed_2455 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2455" - 3-oxoacyl-ACP reductase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_24553-oxoacyl-ACP reductase (256 aa)    
Predicted Functional Partners:
Psed_2458
5-oxoprolinase (683 aa)
              0.859
Psed_2457
Hydantoinase B/oxoprolinase (665 aa)
              0.859
Psed_2456
Hypothetical protein (81 aa)
              0.859
Psed_1361
3-oxoacyl-ACP reductase (305 aa)
   
          0.778
Psed_3729
3-oxoacyl-ACP reductase (272 aa)
   
          0.777
Psed_2113
Short-chain dehydrogenase/reductase SDR (235 aa)
   
          0.754
Psed_3687
Short-chain dehydrogenase/reductase SDR (247 aa)
   
          0.730
Psed_6326
Short-chain dehydrogenase/reductase SDR (244 aa)
   
          0.664
Psed_5685
3-hydroxyacyl-CoA dehydrogenase (326 aa)
   
          0.595
Psed_1175
Short-chain dehydrogenase/reductase SDR (233 aa)
   
          0.556
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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