STRINGSTRING
Psed_2466 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2466" - Protocatechuate 4,5-dioxygenase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2466Protocatechuate 4,5-dioxygenase (285 aa)    
Predicted Functional Partners:
Psed_2465
Extradiol ring-cleavage dioxygenase class III protein subunit A (119 aa)
   
  0.999
Psed_2464
Glycine cleavage T protein (aminomethyl transferase) (475 aa)
 
   
    0.966
Psed_1564
4-hydroxybenzoate 3-monooxygenase (393 aa)
 
 
  0.966
Psed_2966
Rieske (2Fe-2S) domain-containing protein (361 aa)
 
   
  0.932
Psed_1566
Protocatechuate 3,4-dioxygenase subunit alpha (197 aa)
         
    0.900
Psed_1565
Protocatechuate 3,4-dioxygenase subunit beta (240 aa)
         
    0.900
Psed_3699
Dimethylmenaquinone methyltransferase (227 aa)
 
     
  0.865
Psed_6533
Extradiol ring-cleavage dioxygenase class III protein subunit B (288 aa)
   
   
 
0.851
Psed_0543
Dimethylmenaquinone methyltransferase (220 aa)
 
     
  0.732
Psed_3921
Phthalate 4,5-dioxygenase (460 aa)
 
     
  0.673
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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