STRINGSTRING
Psed_2485 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2485" - TetR family transcriptional regulator in Pseudonocardia dioxanivorans
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2485TetR family transcriptional regulator (197 aa)    
Predicted Functional Partners:
Psed_1424
Major facilitator superfamily protein (415 aa)
 
          0.639
Psed_0478
Major facilitator superfamily protein (413 aa)
 
          0.556
Psed_2484
ABC transporter (624 aa)
              0.527
Psed_2486
Pyridoxamine 5’-phosphate oxidase-related FMN-binding protein (153 aa)
              0.475
Psed_4405
Tetracycline repressor (237 aa)
   
          0.438
Psed_1649
Pentapeptide repeat-containing protein (292 aa)
   
          0.436
Psed_2483
ABC transporter substrate-binding protein (410 aa)
              0.406
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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