STRINGSTRING
Psed_2499 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2499" - Carbon-monoxide dehydrogenase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2499Carbon-monoxide dehydrogenase (174 aa)    
Predicted Functional Partners:
Psed_2498
Carbon-monoxide dehydrogenase (816 aa)
 
  0.989
Psed_0760
NADH dehydrogenase (ubiquinone) 30 kDa subunit (504 aa)
       
      0.980
Psed_2500
Carbon-monoxide dehydrogenase (298 aa)
 
  0.976
Psed_3755
Xanthine dehydrogenase (790 aa)
 
  0.952
Psed_6472
Xanthine dehydrogenase (773 aa)
 
  0.951
Psed_6140
Carbon-monoxide dehydrogenase (830 aa)
 
  0.946
Psed_1760
Xanthine dehydrogenase (756 aa)
 
  0.943
Psed_5673
Carbon monoxide dehydrogenase subunit G (248 aa)
 
 
  0.940
Psed_3757
Carbon monoxide dehydrogenase subunit G (306 aa)
   
 
  0.940
Psed_2952
Carbon monoxide dehydrogenase subunit G (227 aa)
   
 
  0.940
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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