STRINGSTRING
Psed_2516 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2516" - OsmC family protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2516OsmC family protein (173 aa)    
Predicted Functional Partners:
Psed_6315
OsmC family protein (159 aa)
   
          0.775
Psed_1617
OsmC family protein (158 aa)
   
          0.742
Psed_3345
S-adenosylmethionine decarboxylase; Catalyzes the decarboxylation of S-adenosylmethionine to S-adenosylmethioninamine (dcAdoMet), the propylamine donor required for the synthesis of the polyamines spermine and spermidine from the diamine putrescine (399 aa)
              0.514
Psed_2517
F420-dependent oxidoreductase (302 aa)
              0.440
Psed_2518
IclR family transcriptional regulator (265 aa)
              0.428
trpC
Indole-3-glycerol phosphate synthase (279 aa)
              0.412
Psed_5878
Bifunctional deaminase-reductase domain-containing protein (204 aa)
              0.408
Psed_3795
Bifunctional deaminase-reductase domain-containing protein (184 aa)
              0.408
Psed_1930
Bifunctional deaminase-reductase domain-containing protein (192 aa)
              0.408
Psed_1817
Bifunctional deaminase-reductase domain-containing protein (216 aa)
              0.408
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (13%) [HD]