STRINGSTRING
Psed_2535 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2535" - Peroxidase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2535Peroxidase (402 aa)    
Predicted Functional Partners:
Psed_2536
propanoyl-CoA C-acyltransferase (376 aa)
   
   
  0.881
Psed_2537
Hypothetical protein (138 aa)
              0.863
Psed_2751
ferredoxin-NADP reductase (456 aa)
       
  0.767
Psed_1954
Glutamate synthase, NADH/NADPH small subunit (484 aa)
       
  0.746
Psed_1477
Cytochrome P450 (407 aa)
   
          0.685
Psed_2539
3-oxoacyl-ACP reductase (277 aa)
   
 
  0.680
Psed_2540
o-succinylbenzoate--CoA ligase (513 aa)
   
   
  0.674
Psed_2541
phenylacetate--CoA ligase (453 aa)
              0.590
Psed_2538
Luciferase-like protein (369 aa)
   
        0.584
Psed_0252
Amino acid adenylation protein (7912 aa)
     
 
  0.573
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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