STRINGSTRING
Psed_2581 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2581" - Amidohydrolase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2581Amidohydrolase (380 aa)    
Predicted Functional Partners:
Psed_2582
Rieske (2Fe-2S) domain-containing protein (131 aa)
 
     
  0.978
Psed_2579
Hypothetical protein (137 aa)
 
          0.862
Psed_2475
Rieske (2Fe-2S) domain-containing protein (121 aa)
 
     
  0.861
Psed_6319
Rieske (2Fe-2S) domain-containing protein (145 aa)
 
     
  0.841
Psed_2583
o-succinylbenzoate--CoA ligase (516 aa)
   
        0.828
Psed_2584
3-oxoacyl-ACP reductase (249 aa)
              0.818
Psed_2585
Amidohydrolase (259 aa)
              0.815
Psed_2580
Hypothetical protein (385 aa)
              0.808
Psed_2578
Hypothetical protein (289 aa)
              0.805
Psed_2586
3-oxoacyl-ACP reductase (253 aa)
              0.765
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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