STRINGSTRING
Psed_2587 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2587" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2587Major facilitator superfamily protein (438 aa)    
Predicted Functional Partners:
Psed_2588
Cytochrome P450 (413 aa)
              0.613
Psed_4300
Nitrate reductase subunit alpha (1234 aa)
   
          0.569
Psed_4301
Nitrate reductase subunit beta (580 aa)
   
          0.523
Psed_2589
Linalool 8-monooxygenase (409 aa)
              0.486
Psed_4302
Nitrate reductase molybdenum cofactor assembly chaperone (214 aa)
   
          0.472
Psed_2590
3-oxoacyl-ACP reductase (264 aa)
              0.460
Psed_4303
Respiratory nitrate reductase subunit gamma (244 aa)
   
          0.417
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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