STRINGSTRING
Psed_2588 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2588" - Cytochrome P450 in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2588Cytochrome P450 (413 aa)    
Predicted Functional Partners:
Psed_2751
ferredoxin-NADP reductase (456 aa)
 
   
  0.789
Psed_0220
Peroxidase (400 aa)
   
          0.776
Psed_6445
Cytochrome P450 (397 aa)
   
          0.775
Psed_2740
Linalool 8-monooxygenase (420 aa)
   
          0.775
Psed_3788
Peroxidase (406 aa)
   
          0.774
Psed_1700
Linalool 8-monooxygenase (413 aa)
   
          0.774
Psed_0494
Cytochrome P450 (396 aa)
   
          0.774
Psed_5904
Cytochrome P450 (405 aa)
   
          0.773
Psed_5473
Linalool 8-monooxygenase (428 aa)
   
          0.773
Psed_4431
Linalool 8-monooxygenase (413 aa)
   
          0.773
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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