STRINGSTRING
Psed_2662 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2662" - Major facilitator superfamily protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2662Major facilitator superfamily protein (529 aa)    
Predicted Functional Partners:
Psed_1803
Major facilitator superfamily protein (502 aa)
   
          0.751
Psed_5984
Major facilitator superfamily protein (531 aa)
   
          0.748
Psed_2661
EmrB/QacA subfamily drug resistance transporter (532 aa)
 
   
0.743
Psed_3225
Major facilitator superfamily protein (495 aa)
   
          0.718
Psed_6625
TetR family transcriptional regulator (187 aa)
 
          0.642
Psed_2663
Peptidase M24 (237 aa)
              0.587
Psed_2660
TetR family transcriptional regulator (242 aa)
   
   
  0.556
uvrA
UvrABC system protein A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (970 aa)
 
     
  0.522
Psed_3266
ABC transporter (796 aa)
 
     
  0.516
Psed_2664
Haloacid dehalogenase (229 aa)
              0.510
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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