STRINGSTRING
Psed_2680 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2680" - Cysteine desulfurase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2680Cysteine desulfurase (473 aa)    
Predicted Functional Partners:
Psed_3398
FeS assembly protein SufB (478 aa)
 
 
  0.976
Psed_3397
FeS assembly protein SufD (397 aa)
 
 
  0.954
Psed_1775
Cysteine desulfurase (477 aa)
 
 
0.950
Psed_3396
FeS assembly ATPase SufC (258 aa)
 
   
  0.936
Psed_2992
Cysteine desulfurase (407 aa)
   
 
 
0.931
Psed_3395
SufS subfamily cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L- selenocystine to produce L-alanine (439 aa)
   
   
 
0.923
Psed_5265
Fe-S metabolism associated SufE (148 aa)
   
 
  0.888
Psed_3394
NifU family SUF system FeS assembly protein (152 aa)
 
 
  0.702
Psed_4555
Iron-sulfur cluster assembly accessory protein (124 aa)
   
 
  0.686
glnD
UTP-GlnB uridylyltransferase, GlnD; Modifies, by uridylylation and deuridylylation, the PII regulatory proteins (GlnB and homologs), in response to the nitrogen status of the cell that GlnD senses through the glutamine level. Under low glutamine levels, catalyzes the conversion of the PII proteins and UTP to PII-UMP and PPi, while under higher glutamine levels, GlnD hydrolyzes PII-UMP to PII and UMP (deuridylylation). Thus, controls uridylylation state and activity of the PII proteins, and plays an important role in the regulation of nitrogen assimilation and metabolism (801 aa)
     
      0.633
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (6%) [HD]