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Psed_2686 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2686" - SMP-30/Gluconolaconase/LRE-like region-containing protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2686SMP-30/Gluconolaconase/LRE-like region-containing protein (306 aa)    
Predicted Functional Partners:
Psed_0488
Cyclohexanone monooxygenase (536 aa)
 
 
    0.917
Psed_3572
Thermoresistant glucokinase carbohydrate kinase (184 aa)
       
  0.905
Psed_2683
SMP-30/Gluconolaconase/LRE-like region-containing protein (316 aa)
 
   
 
0.875
Psed_2685
ABC transporter substrate-binding protein (537 aa)
              0.859
Psed_0302
HAD-superfamily hydrolase (225 aa)
 
        0.684
Psed_5917
long-chain-fatty-acid--CoA ligase (633 aa)
   
        0.679
Psed_2684
3-oxoacyl-ACP reductase (252 aa)
   
   
  0.582
Psed_1368
SMP-30/Gluconolaconase/LRE-like region-containing protein (283 aa)
   
          0.574
Psed_2495
Hypothetical protein (101 aa)
   
          0.572
Psed_2619
o-succinylbenzoate--CoA ligase (511 aa)
   
        0.510
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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