STRINGSTRING
Psed_2690 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2690" - DSBA oxidoreductase in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2690DSBA oxidoreductase (260 aa)    
Predicted Functional Partners:
Psed_2691
Cytochrome P450 (431 aa)
              0.657
Psed_2689
F420-dependent oxidoreductase (336 aa)
 
          0.607
Psed_2007
Hypothetical protein (259 aa)
   
        0.590
Psed_1198
DoxX family protein (166 aa)
 
          0.575
Psed_4621
Helix-turn-helix domain-containing protein (123 aa)
   
          0.520
Psed_5609
Cytochrome c biogenesis protein transmembrane region (257 aa)
         
  0.484
Psed_1300
Cytochrome c biogenesis protein transmembrane region (288 aa)
         
  0.484
Psed_0186
Hypothetical protein (573 aa)
   
          0.457
Psed_5186
NUDIX hydrolase (161 aa)
   
 
      0.447
Psed_5626
Hypothetical protein (526 aa)
   
          0.447
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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