STRINGSTRING
Psed_2693 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2693" - Coenzyme F420-dependent NADP oxidoreductase in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2693Coenzyme F420-dependent NADP oxidoreductase (218 aa)    
Predicted Functional Partners:
Psed_3088
Coenzyme F420-dependent NADP oxidoreductase (226 aa)
 
          0.702
Psed_2694
Hypothetical protein (151 aa)
              0.563
Psed_3360
Luciferase-like protein (363 aa)
 
     
  0.542
Psed_3364
Luciferase-like protein (345 aa)
 
     
  0.538
Psed_2692
Hypothetical protein (350 aa)
              0.534
Psed_2538
Luciferase-like protein (369 aa)
 
     
  0.530
Psed_5207
F420-0-gamma-glutamyl ligase (454 aa)
   
   
  0.529
Psed_2374
Luciferase-like protein (364 aa)
 
     
  0.510
Psed_6467
5,10-methylenetetrahydromethanopterin reductase (330 aa)
 
     
  0.502
Psed_0909
Integrase catalytic subunit (512 aa)
   
          0.501
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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