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Psed_2709 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2709" - NRAMP family Mn2+/Fe2+ transporter in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2709NRAMP family Mn2+/Fe2+ transporter (416 aa)    
Predicted Functional Partners:
Psed_0041
Natural resistance-associated macrophage protein (434 aa)
   
     
  0.804
Psed_3040
DtxR family iron (metal) dependent repressor (220 aa)
       
  0.650
Psed_6167
Urea amidolyase (282 aa)
   
   
  0.612
Psed_5564
NADH-quinone oxidoreductase subunit F (450 aa)
       
      0.602
Psed_3297
Respiratory-chain NADH dehydrogenase domain 51 kDa subunit (626 aa)
       
      0.602
Psed_3042
NADH dehydrogenase (quinone) (499 aa)
       
      0.602
Psed_6165
Hypothetical protein (252 aa)
   
   
  0.593
Psed_6166
Hypothetical protein (210 aa)
   
   
  0.592
Psed_2708
precorrin-6A synthase (261 aa)
              0.584
Psed_4265
ATPase (906 aa)
   
 
  0.563
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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