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Psed_2710 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2710" - ATP-binding protein in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2710ATP-binding protein (156 aa)    
Predicted Functional Partners:
Psed_1173
Lytic transglycosylase catalytic (269 aa)
   
          0.703
Psed_2423
Polyketide cyclase/dehydrase (149 aa)
   
          0.648
Psed_1531
Anti-anti-sigma factor (150 aa)
   
          0.556
Psed_0434
Response regulator receiver modulated serine phosphatase (397 aa)
   
          0.546
Psed_4476
Hypothetical protein (131 aa)
   
          0.532
Psed_2308
Response regulator receiver modulated serine phosphatase (562 aa)
   
          0.509
Psed_2709
NRAMP family Mn2+/Fe2+ transporter (416 aa)
              0.493
Psed_4046
Ser/Thr phosphatase (619 aa)
   
          0.489
Psed_6562
Hypothetical protein (1018 aa)
   
          0.466
Psed_1163
Regulatory protein ArsR (97 aa)
   
          0.464
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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