STRINGSTRING
Psed_2721 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2721" - Hypothetical protein in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2721Hypothetical protein (326 aa)    
Predicted Functional Partners:
Psed_3403
Cytochrome oxidase assembly (350 aa)
 
 
  0.942
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (325 aa)
 
 
  0.809
Psed_4546
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (315 aa)
 
 
  0.794
Psed_4662
Processing peptidase (446 aa)
   
      0.791
Psed_1111
Peptidase M16 domain-containing protein (457 aa)
   
      0.791
Psed_1110
Peptidase M16 domain-containing protein (430 aa)
   
      0.791
Psed_2756
Cytochrome c class I (286 aa)
 
        0.765
Psed_2755
Rieske (2Fe-2S) domain-containing protein (378 aa)
   
 
  0.762
Psed_5608
ResB family protein (635 aa)
   
        0.758
Psed_1495
Cytochrome c oxidase subunit I; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. CO I is the catalytic subunit of the enzyme. Electrons originating in cytochrome c are transferred via the copper A center of subunit 2 and heme A of subunit 1 to the bimetallic center formed by heme A3 and copper B (584 aa)
 
 
  0.686
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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