STRINGSTRING
Psed_2742 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2742" - 3-oxoacid CoA-transferase subunit A in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_27423-oxoacid CoA-transferase subunit A (256 aa)    
Predicted Functional Partners:
Psed_2741
3-oxoacid CoA-transferase subunit B (208 aa)
  0.999
Psed_0777
3-oxoacid CoA-transferase subunit B (221 aa)
 
  0.984
Psed_3035
3-oxoacid CoA-transferase subunit A (482 aa)
 
0.973
Psed_0649
3-hydroxybutyryl-CoA epimerase (720 aa)
   
  0.953
Psed_6174
acetyl-CoA acetyltransferase (426 aa)
   
 
  0.952
Psed_6148
acetyl-CoA acetyltransferase (403 aa)
   
 
  0.952
Psed_1715
acetyl-CoA acetyltransferase (396 aa)
   
 
  0.952
Psed_0932
acetyl-CoA acetyltransferase (409 aa)
   
 
  0.952
Psed_0648
acetyl-CoA acetyltransferase (406 aa)
   
 
  0.952
Psed_3737
propanoyl-CoA C-acyltransferase (397 aa)
   
 
  0.951
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]