STRINGSTRING
Psed_2813 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2813" - Hypothetical protein in Pseudonocardia dioxanivorans
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2813Hypothetical protein (95 aa)    
Predicted Functional Partners:
sepF
Cell division protein sepF; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA (248 aa)
   
   
  0.893
Psed_2814
DivIVA domain-containing protein (286 aa)
 
     
  0.876
Psed_2811
Hypothetical protein (246 aa)
   
   
  0.802
Psed_1121
Hypothetical protein (514 aa)
   
        0.755
Psed_2132
Hypothetical protein (162 aa)
   
          0.751
Psed_3055
Hypothetical protein (100 aa)
   
          0.738
Psed_0439
Hypothetical protein (110 aa)
 
          0.726
nucS
Hypothetical protein; Cleaves both 3’ and 5’ ssDNA extremities of branched DNA structures (219 aa)
   
        0.689
Psed_0608
Hypothetical protein (484 aa)
   
        0.683
Psed_5202
Hypothetical protein (120 aa)
   
          0.680
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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