STRINGSTRING
Psed_2853 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2853" - vitamin-B12 independent methionine synthase in Pseudonocardia dioxanivorans
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2853vitamin-B12 independent methionine synthase (344 aa)    
Predicted Functional Partners:
Psed_2107
Methionine synthase (603 aa)
   
  0.991
ahcY
Adenosylhomocysteinase; May play a key role in the regulation of the intracellular concentration of adenosylhomocysteine (503 aa)
     
 
  0.980
Psed_3439
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (400 aa)
   
  0.975
Psed_2101
S-adenosylmethionine synthase; Catalyzes the formation of S-adenosylmethionine from methionine and ATP. The overall synthetic reaction is composed of two sequential steps, AdoMet formation and the subsequent tripolyphosphate hydrolysis which occurs prior to release of AdoMet from the enzyme (411 aa)
   
  0.975
Psed_0939
Cys/Met metabolism pyridoxal-phosphate-dependent protein (382 aa)
   
 
  0.955
Psed_3633
Cystathionine gamma-synthase (390 aa)
   
 
  0.942
Psed_1840
Cystathionine gamma-lyase (366 aa)
   
 
  0.942
Psed_0938
Cystathionine beta-synthase (456 aa)
   
 
  0.938
Psed_3326
Methionine synthase (1190 aa)
   
 
  0.938
Psed_0126
vitamin-B12 independent methionine synthase (366 aa)
 
   
    0.936
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
Server load: low (7%) [HD]