STRINGSTRING
Psed_2887 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2887" - Diguanylate cyclase in Pseudonocardia dioxanivorans
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2887Diguanylate cyclase (455 aa)    
Predicted Functional Partners:
Psed_4754
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.853
Psed_4753
Nitrogen regulatory protein P-II (127 aa)
   
 
  0.853
Psed_4751
Nitrogen regulatory protein P-II (112 aa)
   
 
  0.853
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (689 aa)
         
  0.793
Psed_2889
Winged helix family two component transcriptional regulator (221 aa)
          0.782
Psed_5134
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase (925 aa)
 
          0.778
Psed_0548
PAS/PAC sensor protein (1401 aa)
   
 
  0.762
Psed_2890
Histidine kinase (393 aa)
 
          0.762
Psed_4731
RNA polymerase sigma 28 subunit FliA/WhiG; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released (429 aa)
 
   
  0.708
Psed_6227
LuxR family transcriptional regulator (221 aa)
   
 
  0.704
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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