STRINGSTRING
Psed_2889 protein (Pseudonocardia dioxanivorans) - STRING interaction network
"Psed_2889" - Winged helix family two component transcriptional regulator in Pseudonocardia dioxanivorans
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Psed_2889Winged helix family two component transcriptional regulator (221 aa)    
Predicted Functional Partners:
Psed_2890
Histidine kinase (393 aa)
     
  0.979
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (689 aa)
              0.866
Psed_6412
Histidine kinase (364 aa)
 
     
  0.818
Psed_0995
Histidine kinase (439 aa)
          0.782
Psed_2887
Diguanylate cyclase (455 aa)
          0.782
Psed_6021
Histidine kinase (461 aa)
          0.748
Psed_3958
Histidine kinase (459 aa)
 
          0.729
Psed_1868
Histidine kinase (451 aa)
   
          0.728
Psed_5142
Histidine kinase (492 aa)
 
          0.721
Psed_5639
Histidine kinase (406 aa)
 
          0.715
Your Current Organism:
Pseudonocardia dioxanivorans
NCBI taxonomy Id: 675635
Other names: Actinobispora, Amycolata, P. dioxanivorans, P. dioxanivorans CB1190, Pseudamycolata, Pseudoamycolata, Pseudonocardia, Pseudonocardia dioxanivorans, Pseudonocardia dioxanivorans CB1190, Pseudonocardia dioxanivorans DSM 44775, Pseudonocardia dioxanivorans Mahendra and Alvarez-Cohen 2005, Pseudonocardia dioxanivorans str. CB1190, Pseudonocardia dioxanivorans strain CB1190
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